Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PSEN1P49768 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.31■□□□□ 0.04
PSEN1P49768 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 Y_RNA.110-201ENST00000363220 99 ntBASIC15.31■□□□□ 0.04
PSEN1P49768 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.31■□□□□ 0.04
PSEN1P49768 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.31■□□□□ 0.04
PSEN1P49768 AC006122.1-201ENST00000493323 440 ntBASIC15.31■□□□□ 0.04
PSEN1P49768 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.31■□□□□ 0.04
PSEN1P49768 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.31■□□□□ 0.04
PSEN1P49768 AF117829.2-201ENST00000619538 361 ntBASIC15.31■□□□□ 0.04
PSEN1P49768 AL109659.3-201ENST00000624985 950 ntBASIC15.31■□□□□ 0.04
PSEN1P49768 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 AL139099.5-201ENST00000635274 300 ntBASIC15.31■□□□□ 0.04
PSEN1P49768 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
PSEN1P49768 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PSEN1P49768 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.31■□□□□ 0.04
PSEN1P49768 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.31■□□□□ 0.04
PSEN1P49768 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PSEN1P49768 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.31■□□□□ 0.04
PSEN1P49768 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.31■□□□□ 0.04
PSEN1P49768 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSEN1P49768 CICP7-201ENST00000432723 2477 ntBASIC15.31■□□□□ 0.04
PSEN1P49768 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.3■□□□□ 0.04
PSEN1P49768 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC15.3■□□□□ 0.04
PSEN1P49768 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PSEN1P49768 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 WDYHV1-201ENST00000287387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 AL591499.1-201ENST00000307155 1153 ntBASIC15.3■□□□□ 0.04
PSEN1P49768 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 ZNF736P10Y-201ENST00000403990 1110 ntBASIC15.3■□□□□ 0.04
PSEN1P49768 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.3■□□□□ 0.04
PSEN1P49768 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 CCT6P3-203ENST00000452026 1383 ntBASIC15.3■□□□□ 0.04
PSEN1P49768 AC125604.1-201ENST00000496255 707 ntBASIC15.3■□□□□ 0.04
PSEN1P49768 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC15.3■□□□□ 0.04
PSEN1P49768 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 SCARNA21-201ENST00000517026 139 ntBASIC15.3■□□□□ 0.04
PSEN1P49768 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PSEN1P49768 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.3■□□□□ 0.04
PSEN1P49768 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.3■□□□□ 0.04
PSEN1P49768 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms