Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 REXO1L6P-201ENST00000603433 1515 ntBASIC15.07■□□□□ 0
SSR1P43307 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.07■□□□□ 0
SSR1P43307 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 USO1-201ENST00000264904 4135 ntTSL 2 BASIC15.07■□□□□ 0
SSR1P43307 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SSR1P43307 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.07■□□□□ 0
SSR1P43307 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SSR1P43307 AC099336.1-201ENST00000417053 1171 ntBASIC15.07■□□□□ 0
SSR1P43307 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SSR1P43307 U91328.1-201ENST00000437528 223 ntBASIC15.07■□□□□ 0
SSR1P43307 ST13P19-201ENST00000442505 1124 ntBASIC15.07■□□□□ 0
SSR1P43307 AC012441.2-201ENST00000444843 739 ntBASIC15.07■□□□□ 0
SSR1P43307 GPR53P-205ENST00000457298 1084 ntBASIC15.07■□□□□ 0
SSR1P43307 AC021723.1-201ENST00000486306 515 ntBASIC15.07■□□□□ 0
SSR1P43307 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.07■□□□□ 0
SSR1P43307 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.07■□□□□ 0
SSR1P43307 HILS1-202ENST00000545329 423 ntBASIC15.07■□□□□ 0
SSR1P43307 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.07■□□□□ 0
SSR1P43307 EEF1DP1-201ENST00000585891 896 ntBASIC15.07■□□□□ 0
SSR1P43307 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.07■□□□□ 0
SSR1P43307 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.07■□□□□ 0
SSR1P43307 AC133552.6-201ENST00000613406 534 ntBASIC15.07■□□□□ 0
SSR1P43307 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.07■□□□□ 0
SSR1P43307 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SSR1P43307 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.07■□□□□ 0
SSR1P43307 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SSR1P43307 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.07■□□□□ 0
SSR1P43307 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSR1P43307 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC15.07■□□□□ 0
SSR1P43307 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
SSR1P43307 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.06■□□□□ 0
SSR1P43307 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SSR1P43307 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.06■□□□□ 0
SSR1P43307 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
SSR1P43307 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SSR1P43307 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 AC079776.1-201ENST00000401540 1152 ntBASIC15.06■□□□□ 0
SSR1P43307 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.06■□□□□ 0
SSR1P43307 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.06■□□□□ 0
SSR1P43307 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.06■□□□□ 0
SSR1P43307 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 MIR4783-201ENST00000580343 82 ntBASIC15.06■□□□□ 0
SSR1P43307 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SSR1P43307 AC010328.2-201ENST00000597698 1111 ntBASIC15.06■□□□□ 0
SSR1P43307 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SSR1P43307 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SSR1P43307 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 Z98259.2-201ENST00000641583 609 ntBASIC15.06■□□□□ 0
SSR1P43307 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
SSR1P43307 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.06■□□□□ 0
SSR1P43307 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SSR1P43307 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.06■□□□□ 0
SSR1P43307 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms