Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.11■□□□□ 0.65
CPS1P31327 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 AC245140.2-201ENST00000624054 1939 ntBASIC19.11■□□□□ 0.65
CPS1P31327 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC19.11■□□□□ 0.65
CPS1P31327 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 CICP16-201ENST00000502609 2813 ntBASIC19.11■□□□□ 0.65
CPS1P31327 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CPS1P31327 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC19.11■□□□□ 0.65
CPS1P31327 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPS1P31327 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 AL513497.1-201ENST00000624273 2083 ntBASIC19.11■□□□□ 0.65
CPS1P31327 AC040160.2-201ENST00000623816 1675 ntBASIC19.11■□□□□ 0.65
CPS1P31327 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CPS1P31327 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC19.1■□□□□ 0.65
CPS1P31327 BX640514.1-201ENST00000583223 1918 ntBASIC19.1■□□□□ 0.65
CPS1P31327 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 PGAM1P10-201ENST00000402426 761 ntBASIC19.1■□□□□ 0.65
CPS1P31327 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC19.1■□□□□ 0.65
CPS1P31327 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 AC008267.3-201ENST00000448776 712 ntBASIC19.1■□□□□ 0.65
CPS1P31327 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC19.1■□□□□ 0.65
CPS1P31327 AC009132.1-201ENST00000565194 320 ntBASIC19.1■□□□□ 0.65
CPS1P31327 MED11-203ENST00000575284 652 ntTSL 3 BASIC19.1■□□□□ 0.65
CPS1P31327 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC19.1■□□□□ 0.65
CPS1P31327 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CPS1P31327 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.1■□□□□ 0.65
CPS1P31327 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CPS1P31327 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC19.1■□□□□ 0.65
CPS1P31327 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC19.1■□□□□ 0.65
CPS1P31327 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.1■□□□□ 0.65
CPS1P31327 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CPS1P31327 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 SNORA50D-201ENST00000408059 134 ntBASIC19.1■□□□□ 0.65
CPS1P31327 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC19.1■□□□□ 0.65
CPS1P31327 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC19.1■□□□□ 0.65
CPS1P31327 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC19.1■□□□□ 0.65
CPS1P31327 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPS1P31327 GOLGA2P10-201ENST00000550961 817 ntBASIC19.1■□□□□ 0.65
CPS1P31327 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC19.1■□□□□ 0.65
CPS1P31327 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC19.1■□□□□ 0.65
CPS1P31327 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC19.1■□□□□ 0.65
CPS1P31327 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CPS1P31327 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPS1P31327 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPS1P31327 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CPS1P31327 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CPS1P31327 GOLGA8VP-201ENST00000559009 1798 ntBASIC19.09■□□□□ 0.65
CPS1P31327 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPS1P31327 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPS1P31327 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CPS1P31327 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CPS1P31327 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CPS1P31327 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPS1P31327 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPS1P31327 AC090643.2-201ENST00000623442 2029 ntBASIC19.09■□□□□ 0.65
CPS1P31327 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CPS1P31327 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPS1P31327 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC19.09■□□□□ 0.65
CPS1P31327 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC19.09■□□□□ 0.65
CPS1P31327 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPS1P31327 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPS1P31327 RPL35P1-201ENST00000450819 370 ntBASIC19.09■□□□□ 0.65
CPS1P31327 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CPS1P31327 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC19.09■□□□□ 0.65
CPS1P31327 FP325317.1-201ENST00000539936 1042 ntBASIC19.09■□□□□ 0.65
CPS1P31327 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC19.09■□□□□ 0.65
CPS1P31327 AC009779.7-201ENST00000609031 469 ntBASIC19.09■□□□□ 0.65
CPS1P31327 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPS1P31327 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC19.09■□□□□ 0.65
CPS1P31327 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPS1P31327 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPS1P31327 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPS1P31327 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.08■□□□□ 0.65
CPS1P31327 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CPS1P31327 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPS1P31327 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CPS1P31327 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPS1P31327 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CPS1P31327 TBC1D3P1-201ENST00000590047 1693 ntBASIC19.08■□□□□ 0.64
CPS1P31327 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CPS1P31327 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC19.08■□□□□ 0.64
CPS1P31327 RNA5SP84-201ENST00000364740 107 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms