Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 COL6A4P2-202ENST00000504443 2753 ntBASIC14.14□□□□□ -0.15
APOA4P06727 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.14□□□□□ -0.15
APOA4P06727 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 AC103592.1-201ENST00000394513 664 ntBASIC14.13□□□□□ -0.15
APOA4P06727 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 MARK2P5-201ENST00000507649 634 ntBASIC14.13□□□□□ -0.15
APOA4P06727 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.13□□□□□ -0.15
APOA4P06727 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.13□□□□□ -0.15
APOA4P06727 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA4P06727 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA4P06727 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA4P06727 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.12□□□□□ -0.15
APOA4P06727 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.12□□□□□ -0.15
APOA4P06727 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.12□□□□□ -0.15
APOA4P06727 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.12□□□□□ -0.15
APOA4P06727 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
APOA4P06727 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 AL731571.1-201ENST00000617058 5428 ntBASIC14.12□□□□□ -0.15
APOA4P06727 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.12□□□□□ -0.15
APOA4P06727 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.12□□□□□ -0.15
APOA4P06727 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOA4P06727 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.12□□□□□ -0.15
APOA4P06727 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
APOA4P06727 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms