Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
APOBP04114 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 AC064836.1-201ENST00000405197 704 ntBASIC8.33□□□□□ -1.08
APOBP04114 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC8.33□□□□□ -1.08
APOBP04114 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 RN7SL148P-201ENST00000467120 279 ntBASIC8.33□□□□□ -1.08
APOBP04114 RN7SL827P-201ENST00000607480 288 ntBASIC8.33□□□□□ -1.08
APOBP04114 AC010776.3-201ENST00000617349 424 ntBASIC8.33□□□□□ -1.08
APOBP04114 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC8.33□□□□□ -1.08
APOBP04114 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC8.33□□□□□ -1.08
APOBP04114 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 AC023830.3-201ENST00000612995 1455 ntBASIC8.33□□□□□ -1.08
APOBP04114 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 PTPA-219ENST00000435305 530 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 AC079944.2-201ENST00000478867 734 ntBASIC8.32□□□□□ -1.08
APOBP04114 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 AC063924.1-201ENST00000546680 673 ntBASIC8.32□□□□□ -1.08
APOBP04114 AL355075.5-201ENST00000553568 890 ntBASIC8.32□□□□□ -1.08
APOBP04114 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC8.32□□□□□ -1.08
APOBP04114 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
APOBP04114 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 AL049597.1-201ENST00000447415 555 ntBASIC8.32□□□□□ -1.08
APOBP04114 AC016304.1-201ENST00000476363 413 ntBASIC8.32□□□□□ -1.08
APOBP04114 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC8.32□□□□□ -1.08
APOBP04114 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 AC010601.2-201ENST00000623060 774 ntBASIC8.32□□□□□ -1.08
APOBP04114 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 ERG-211ENST00000453032 1595 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 AC020763.3-201ENST00000625095 2904 ntBASIC8.32□□□□□ -1.08
APOBP04114 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 SERF2-205ENST00000403425 690 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 EEF1GP3-201ENST00000421044 1288 ntBASIC8.32□□□□□ -1.08
APOBP04114 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC8.32□□□□□ -1.08
APOBP04114 AP000346.2-202ENST00000425948 383 ntBASIC8.32□□□□□ -1.08
APOBP04114 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC8.32□□□□□ -1.08
APOBP04114 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC8.32□□□□□ -1.08
APOBP04114 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 FRG2EP-201ENST00000634243 835 ntBASIC8.32□□□□□ -1.08
APOBP04114 TUBB8P4-201ENST00000511806 1324 ntBASIC8.32□□□□□ -1.08
APOBP04114 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
APOBP04114 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC8.32□□□□□ -1.08
APOBP04114 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC8.32□□□□□ -1.08
APOBP04114 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 MAS1LP1-206ENST00000419416 1047 ntBASIC8.32□□□□□ -1.08
APOBP04114 RPE-208ENST00000436630 1128 ntTSL 2 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms