Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 AL139158.3-201ENST00000641212 1562 ntBASIC13.69□□□□□ -0.22
KRT6AP02538 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 AC063926.2-201ENST00000623766 1308 ntBASIC13.68□□□□□ -0.22
KRT6AP02538 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 AC004899.1-201ENST00000424687 1714 ntBASIC13.68□□□□□ -0.22
KRT6AP02538 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 BTBD6P1-201ENST00000412176 1267 ntBASIC13.68□□□□□ -0.22
KRT6AP02538 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.68□□□□□ -0.22
KRT6AP02538 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.68□□□□□ -0.22
KRT6AP02538 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.68□□□□□ -0.22
KRT6AP02538 AC022210.1-201ENST00000449856 793 ntBASIC13.68□□□□□ -0.22
KRT6AP02538 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.68□□□□□ -0.22
KRT6AP02538 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.68□□□□□ -0.22
KRT6AP02538 RNA5SP412-201ENST00000516234 123 ntBASIC13.68□□□□□ -0.22
KRT6AP02538 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 AL136295.7-201ENST00000619226 1200 ntBASIC13.68□□□□□ -0.22
KRT6AP02538 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 SALL4P6-201ENST00000429385 1691 ntBASIC13.68□□□□□ -0.22
KRT6AP02538 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
KRT6AP02538 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.68□□□□□ -0.22
KRT6AP02538 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRT6AP02538 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.67□□□□□ -0.22
KRT6AP02538 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.67□□□□□ -0.22
KRT6AP02538 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
KRT6AP02538 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KRT6AP02538 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 AGAP12P-201ENST00000585227 2359 ntBASIC13.67□□□□□ -0.22
KRT6AP02538 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.67□□□□□ -0.22
KRT6AP02538 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.67□□□□□ -0.22
KRT6AP02538 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.67□□□□□ -0.22
KRT6AP02538 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
KRT6AP02538 LINC01815-202ENST00000641468 1409 ntBASIC13.67□□□□□ -0.22
KRT6AP02538 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.67□□□□□ -0.22
KRT6AP02538 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms