Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 AL592076.1-201ENST00000424448 303 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 NOC2LP1-201ENST00000450578 752 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 RN7SL277P-201ENST00000481521 288 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 AC019193.1-201ENST00000506678 823 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 AC116345.2-201ENST00000512837 523 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 AL590824.1-201ENST00000403828 1349 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
CNOT4O95628 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CNOT4O95628 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.58□□□□□ -0.4
CNOT4O95628 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CNOT4O95628 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.58□□□□□ -0.4
CNOT4O95628 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.58□□□□□ -0.4
CNOT4O95628 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CNOT4O95628 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CNOT4O95628 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.58□□□□□ -0.4
CNOT4O95628 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CNOT4O95628 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.58□□□□□ -0.4
CNOT4O95628 AC098935.1-201ENST00000446057 611 ntBASIC12.58□□□□□ -0.4
CNOT4O95628 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.58□□□□□ -0.4
CNOT4O95628 FGFR3P1-201ENST00000449999 601 ntBASIC12.58□□□□□ -0.4
CNOT4O95628 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 CEP164P1-201ENST00000455142 418 ntBASIC12.58□□□□□ -0.4
CNOT4O95628 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.58□□□□□ -0.4
CNOT4O95628 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.58□□□□□ -0.4
CNOT4O95628 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.58□□□□□ -0.4
CNOT4O95628 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.58□□□□□ -0.4
CNOT4O95628 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CNOT4O95628 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 AL109837.1-201ENST00000603272 613 ntBASIC12.58□□□□□ -0.4
CNOT4O95628 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 TBC1D3J-201ENST00000620719 1426 ntBASIC12.58□□□□□ -0.4
CNOT4O95628 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.58□□□□□ -0.4
CNOT4O95628 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CNOT4O95628 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.58□□□□□ -0.4
CNOT4O95628 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.58□□□□□ -0.4
CNOT4O95628 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.58□□□□□ -0.4
CNOT4O95628 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CNOT4O95628 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CNOT4O95628 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNOT4O95628 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.57□□□□□ -0.4
CNOT4O95628 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms