Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 AL139220.2-207ENST00000434244 2644 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 AP003355.2-201ENST00000605923 2622 ntBASIC10.67□□□□□ -0.7
COLCA2A8K830 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 LRRC37A7P-201ENST00000583900 2759 ntBASIC10.66□□□□□ -0.7
COLCA2A8K830 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 AC245140.2-201ENST00000624054 1939 ntBASIC10.66□□□□□ -0.7
COLCA2A8K830 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
COLCA2A8K830 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 KXD1-217ENST00000602094 2738 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
COLCA2A8K830 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
COLCA2A8K830 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 RCN1P1-201ENST00000400413 996 ntBASIC10.66□□□□□ -0.7
COLCA2A8K830 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC10.66□□□□□ -0.7
COLCA2A8K830 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 GAPDHP40-201ENST00000505218 1006 ntBASIC10.66□□□□□ -0.7
COLCA2A8K830 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
COLCA2A8K830 AC000095.1-201ENST00000603208 874 ntBASIC10.66□□□□□ -0.7
COLCA2A8K830 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 MIR1199-201ENST00000621445 119 ntBASIC10.66□□□□□ -0.7
COLCA2A8K830 HLA-C-210ENST00000640219 976 ntBASIC10.66□□□□□ -0.7
COLCA2A8K830 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 ZNF75D-201ENST00000370764 2977 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.66□□□□□ -0.7
COLCA2A8K830 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
COLCA2A8K830 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
COLCA2A8K830 FMO6P-201ENST00000236166 1620 ntBASIC10.66□□□□□ -0.7
COLCA2A8K830 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
COLCA2A8K830 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC10.65□□□□□ -0.7
COLCA2A8K830 ZMAT4-202ENST00000315769 2250 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC10.65□□□□□ -0.7
COLCA2A8K830 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
COLCA2A8K830 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
COLCA2A8K830 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC10.65□□□□□ -0.7
COLCA2A8K830 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 CANT1-216ENST00000620915 3337 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
COLCA2A8K830 AL138725.1-201ENST00000407347 1314 ntBASIC10.65□□□□□ -0.7
COLCA2A8K830 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
COLCA2A8K830 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
COLCA2A8K830 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
COLCA2A8K830 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.65□□□□□ -0.7
COLCA2A8K830 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.65□□□□□ -0.7
COLCA2A8K830 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
COLCA2A8K830 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
COLCA2A8K830 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC10.65□□□□□ -0.7
COLCA2A8K830 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
COLCA2A8K830 AL353779.1-201ENST00000434793 351 ntBASIC10.65□□□□□ -0.7
COLCA2A8K830 PARL-206ENST00000435888 1098 ntTSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms