Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHACTR1Q9C0D0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHACTR1Q9C0D0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHACTR1Q9C0D0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AC104758.3-203ENST00000562938 2123 ntBASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AL354877.1-201ENST00000424412 413 ntBASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 KRT43P-201ENST00000434019 910 ntBASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 KRT17P7-201ENST00000451704 1104 ntBASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AC079316.1-201ENST00000548397 411 ntBASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AC132938.2-201ENST00000579188 680 ntBASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AC005962.1-201ENST00000584100 773 ntBASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AL139424.3-202ENST00000641619 917 ntBASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 PI4KAP2-201ENST00000360806 2080 ntBASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHACTR1Q9C0D0 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 PCDHA5-203ENST00000614258 4248 ntBASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 AC131212.3-201ENST00000624087 4219 ntBASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 COX5BP8-201ENST00000416911 349 ntBASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 RN7SL121P-201ENST00000584223 273 ntBASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 AC244157.2-201ENST00000616239 1006 ntBASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 AC105233.6-201ENST00000642093 218 ntBASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 AOC4P-203ENST00000566825 2289 ntBASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms