Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SLC25A15P3-201ENST00000505530 290 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 RN7SKP155-201ENST00000516031 288 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 IGHV1-12-201ENST00000518307 205 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL512310.5-201ENST00000551999 515 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 KRT8P2-201ENST00000556193 944 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 DNM1P30-201ENST00000563586 452 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL031713.1-201ENST00000564813 661 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 MIR2392-201ENST00000584881 84 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SIGLEC22P-201ENST00000599104 714 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL118522.1-201ENST00000611368 560 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 HPX-213ENST00000615166 826 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL034417.3-201ENST00000641100 1043 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 GOLGA8UP-201ENST00000527159 1755 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC138761.6-201ENST00000583997 1423 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TBC1D27-202ENST00000424239 1573 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 ODCP-201ENST00000459650 1639 ntBASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP4-3Q9BYR4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms