Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.27□□□□□ -0.12
SEMA3CQ99985 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA3CQ99985 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA3CQ99985 KRT8P43-201ENST00000406052 1458 ntBASIC14.27□□□□□ -0.12
SEMA3CQ99985 TBC1D3J-201ENST00000620719 1426 ntBASIC14.27□□□□□ -0.12
SEMA3CQ99985 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA3CQ99985 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA3CQ99985 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SEMA3CQ99985 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SEMA3CQ99985 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA3CQ99985 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA3CQ99985 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
SEMA3CQ99985 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 RPL8P2-201ENST00000430538 502 ntBASIC14.27□□□□□ -0.13
SEMA3CQ99985 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 AP000358.1-201ENST00000456260 156 ntBASIC14.27□□□□□ -0.13
SEMA3CQ99985 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 MIR5572-201ENST00000583188 137 ntBASIC14.27□□□□□ -0.13
SEMA3CQ99985 AC007326.1-201ENST00000604539 458 ntBASIC14.27□□□□□ -0.13
SEMA3CQ99985 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 AC126335.2-201ENST00000623362 4637 ntBASIC14.27□□□□□ -0.13
SEMA3CQ99985 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA3CQ99985 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.27□□□□□ -0.13
SEMA3CQ99985 MEX3B-202ENST00000558133 4333 ntBASIC14.27□□□□□ -0.13
SEMA3CQ99985 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 CAP2P1-201ENST00000557743 1390 ntBASIC14.26□□□□□ -0.13
SEMA3CQ99985 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 RPL17P11-201ENST00000417593 544 ntBASIC14.26□□□□□ -0.13
SEMA3CQ99985 AC007274.2-201ENST00000421675 662 ntBASIC14.26□□□□□ -0.13
SEMA3CQ99985 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.26□□□□□ -0.13
SEMA3CQ99985 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.26□□□□□ -0.13
SEMA3CQ99985 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 FGFR3P5-201ENST00000564496 886 ntBASIC14.26□□□□□ -0.13
SEMA3CQ99985 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 MIR3677-201ENST00000578964 60 ntBASIC14.26□□□□□ -0.13
SEMA3CQ99985 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 DMBT1P1-203ENST00000636837 4628 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms