Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 RN7SL190P-201ENST00000582519 257 ntBASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 AC133552.6-201ENST00000613406 534 ntBASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 AC092299.1-201ENST00000632679 757 ntBASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 AC022364.1-202ENST00000617468 2409 ntBASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 SNORA50C-201ENST00000408535 133 ntBASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 SNORA50.1-201ENST00000628590 135 ntBASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 AC010970.1-201ENST00000445125 1848 ntBASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 AC022400.8-201ENST00000623453 3599 ntBASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 ZNF493-208ENST00000599461 1769 ntBASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 MICA-210ENST00000616296 2260 ntTSL 5 BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 AC008764.8-201ENST00000623966 2717 ntBASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 AC012531.1-201ENST00000562848 2680 ntBASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 AL022323.5-201ENST00000624101 2059 ntBASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHAMP1Q96JM3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 Z98885.3-201ENST00000624882 1757 ntBASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AGGF1P10-201ENST00000635005 2191 ntBASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AC018629.1-201ENST00000623381 1736 ntBASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AC103592.1-201ENST00000394513 664 ntBASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AC234783.1-201ENST00000441761 496 ntBASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 HOMER2P2-201ENST00000451621 847 ntBASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 SCARNA21-201ENST00000517026 139 ntBASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms