Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HPS1Q92902 AC018665.1-201ENST00000622927 1362 ntBASIC13.09□□□□□ -0.31
HPS1Q92902 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HPS1Q92902 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HPS1Q92902 AC005229.1-201ENST00000392885 409 ntBASIC13.09□□□□□ -0.31
HPS1Q92902 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.09□□□□□ -0.31
HPS1Q92902 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HPS1Q92902 AC013410.2-201ENST00000422627 201 ntBASIC13.09□□□□□ -0.31
HPS1Q92902 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.09□□□□□ -0.31
HPS1Q92902 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.09□□□□□ -0.31
HPS1Q92902 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.09□□□□□ -0.31
HPS1Q92902 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.09□□□□□ -0.31
HPS1Q92902 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.09□□□□□ -0.31
HPS1Q92902 TDH-203ENST00000531764 1110 ntBASIC13.09□□□□□ -0.31
HPS1Q92902 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC13.09□□□□□ -0.31
HPS1Q92902 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.09□□□□□ -0.31
HPS1Q92902 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC13.09□□□□□ -0.31
HPS1Q92902 AC093813.1-201ENST00000605066 256 ntBASIC13.09□□□□□ -0.31
HPS1Q92902 AC025181.2-201ENST00000606994 802 ntBASIC13.09□□□□□ -0.31
HPS1Q92902 MIR6775-201ENST00000617557 69 ntBASIC13.09□□□□□ -0.31
HPS1Q92902 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HPS1Q92902 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 SEPT7P7-201ENST00000420492 1301 ntBASIC13.09□□□□□ -0.31
HPS1Q92902 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.09□□□□□ -0.31
HPS1Q92902 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HPS1Q92902 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 AC092053.3-201ENST00000641308 4975 ntBASIC13.09□□□□□ -0.31
HPS1Q92902 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.09□□□□□ -0.31
HPS1Q92902 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HPS1Q92902 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
HPS1Q92902 AC011498.7-201ENST00000624986 2027 ntBASIC13.08□□□□□ -0.31
HPS1Q92902 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.08□□□□□ -0.32
HPS1Q92902 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HPS1Q92902 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.08□□□□□ -0.32
HPS1Q92902 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 AGAP10P-201ENST00000454844 2418 ntBASIC13.08□□□□□ -0.32
HPS1Q92902 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HPS1Q92902 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
HPS1Q92902 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HPS1Q92902 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.08□□□□□ -0.32
HPS1Q92902 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
HPS1Q92902 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC13.08□□□□□ -0.32
HPS1Q92902 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.08□□□□□ -0.32
HPS1Q92902 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.08□□□□□ -0.32
HPS1Q92902 KLF2P4-201ENST00000451959 1225 ntBASIC13.08□□□□□ -0.32
HPS1Q92902 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC13.08□□□□□ -0.32
HPS1Q92902 AC118282.1-201ENST00000506408 765 ntBASIC13.08□□□□□ -0.32
HPS1Q92902 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms