Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HERVK_113Q902F9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HERVK_113Q902F9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HERVK_113Q902F9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 AC013268.4-201ENST00000637413 2228 ntBASIC14.84□□□□□ -0.03
HERVK_113Q902F9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 SDCBP2P1-201ENST00000416115 614 ntBASIC14.84□□□□□ -0.03
HERVK_113Q902F9 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 AL954722.1-201ENST00000431238 259 ntBASIC14.84□□□□□ -0.03
HERVK_113Q902F9 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 RNA5SP288-201ENST00000516075 93 ntBASIC14.84□□□□□ -0.03
HERVK_113Q902F9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 AC133555.4-201ENST00000569081 152 ntBASIC14.84□□□□□ -0.03
HERVK_113Q902F9 PCTP-206ENST00000573500 919 ntTSL 3 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 OR3A1-202ENST00000615105 966 ntBASIC14.84□□□□□ -0.03
HERVK_113Q902F9 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HERVK_113Q902F9 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
HERVK_113Q902F9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.83□□□□□ -0.03
HERVK_113Q902F9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HERVK_113Q902F9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
HERVK_113Q902F9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HERVK_113Q902F9 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC14.83□□□□□ -0.03
HERVK_113Q902F9 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.83□□□□□ -0.03
HERVK_113Q902F9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 AC087072.1-201ENST00000603727 421 ntBASIC14.83□□□□□ -0.04
HERVK_113Q902F9 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 SNX20-205ENST00000610485 557 ntTSL 5 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 AL139424.3-202ENST00000641619 917 ntBASIC14.83□□□□□ -0.04
HERVK_113Q902F9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 TSPY26P-202ENST00000565928 3884 ntBASIC14.83□□□□□ -0.04
HERVK_113Q902F9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 AL161772.1-201ENST00000610494 4412 ntBASIC14.83□□□□□ -0.04
HERVK_113Q902F9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HERVK_113Q902F9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
HERVK_113Q902F9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HERVK_113Q902F9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HERVK_113Q902F9 PAUPAR-201ENST00000630360 2965 ntBASIC14.82□□□□□ -0.04
HERVK_113Q902F9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HERVK_113Q902F9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.82□□□□□ -0.04
HERVK_113Q902F9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HERVK_113Q902F9 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HERVK_113Q902F9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HERVK_113Q902F9 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms