Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AC087072.1-201ENST00000603727 421 ntBASIC16.64■□□□□ 0.25
SNED1Q8TER0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AC040160.2-201ENST00000623816 1675 ntBASIC16.64■□□□□ 0.25
SNED1Q8TER0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 UGT1A12P-201ENST00000447084 853 ntBASIC16.63■□□□□ 0.25
SNED1Q8TER0 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 SNORA50D-202ENST00000627561 132 ntBASIC16.63■□□□□ 0.25
SNED1Q8TER0 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 AC023908.3-201ENST00000564211 3047 ntBASIC16.63■□□□□ 0.25
SNED1Q8TER0 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
SNED1Q8TER0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNED1Q8TER0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 OLA1P2-201ENST00000395519 1264 ntBASIC16.62■□□□□ 0.25
SNED1Q8TER0 FTH1P18-201ENST00000412071 549 ntBASIC16.62■□□□□ 0.25
SNED1Q8TER0 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 EMP3-204ENST00000596315 761 ntTSL 2 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AL137028.2-201ENST00000614601 256 ntBASIC16.62■□□□□ 0.25
SNED1Q8TER0 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms