Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AC008040.5-201ENST00000599781 1781 ntBASIC21.46■■□□□ 1.03
VPS8Q8N3P4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 PXK-210ENST00000479241 2817 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 SNORD23-201ENST00000408876 110 ntBASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AQP7P5-201ENST00000428759 1049 ntBASIC21.46■■□□□ 1.03
VPS8Q8N3P4 PGK1P2-201ENST00000431702 1214 ntBASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AQP7P4-201ENST00000447083 1042 ntBASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AQP7P2-201ENST00000453967 1041 ntBASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 BAK1P2-201ENST00000532665 631 ntBASIC21.46■■□□□ 1.03
VPS8Q8N3P4 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 MIR6746-201ENST00000620971 63 ntBASIC21.46■■□□□ 1.03
VPS8Q8N3P4 AQP7P3-201ENST00000624547 1041 ntBASIC21.46■■□□□ 1.03
VPS8Q8N3P4 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
VPS8Q8N3P4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
VPS8Q8N3P4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
VPS8Q8N3P4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
VPS8Q8N3P4 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 ZNF877P-201ENST00000437614 612 ntBASIC21.45■■□□□ 1.02
VPS8Q8N3P4 RN7SL494P-201ENST00000461517 304 ntBASIC21.45■■□□□ 1.02
VPS8Q8N3P4 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 AC092903.1-201ENST00000466506 262 ntBASIC21.45■■□□□ 1.02
VPS8Q8N3P4 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 C2orf69P1-201ENST00000563532 1093 ntBASIC21.45■■□□□ 1.02
VPS8Q8N3P4 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 GBAP1-208ENST00000566701 1546 ntBASIC21.45■■□□□ 1.02
VPS8Q8N3P4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 ESR1-214ENST00000638569 132 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS8Q8N3P4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 MSNP1-201ENST00000511640 1732 ntBASIC21.44■■□□□ 1.02
VPS8Q8N3P4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS8Q8N3P4 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms