Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 TREX1-203ENST00000456089 629 ntTSL 3 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 RPL18AP8-201ENST00000486071 528 ntBASIC11.79□□□□□ -0.52
RIPPLY3P57055 PFN2-212ENST00000490975 858 ntTSL 4 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 RHEB-207ENST00000496004 744 ntTSL 2 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 HINT1-205ENST00000508488 703 ntTSL 2 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 METTL7AP1-201ENST00000547343 496 ntBASIC11.79□□□□□ -0.52
RIPPLY3P57055 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 AL021707.6-201ENST00000609212 491 ntBASIC11.79□□□□□ -0.52
RIPPLY3P57055 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 CICP17-201ENST00000418553 2377 ntBASIC11.79□□□□□ -0.52
RIPPLY3P57055 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.79□□□□□ -0.52
RIPPLY3P57055 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RIPPLY3P57055 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 AC055811.4-201ENST00000624039 1754 ntBASIC11.78□□□□□ -0.52
RIPPLY3P57055 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 KRT19P4-201ENST00000443208 943 ntBASIC11.78□□□□□ -0.52
RIPPLY3P57055 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 RN7SL788P-201ENST00000460504 316 ntBASIC11.78□□□□□ -0.52
RIPPLY3P57055 RN7SL487P-201ENST00000468140 344 ntBASIC11.78□□□□□ -0.52
RIPPLY3P57055 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 AL353708.1-201ENST00000567904 1257 ntBASIC11.78□□□□□ -0.52
RIPPLY3P57055 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 RN7SL478P-201ENST00000584358 298 ntBASIC11.78□□□□□ -0.52
RIPPLY3P57055 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 FAM223B-202ENST00000598177 713 ntBASIC11.78□□□□□ -0.52
RIPPLY3P57055 FAM223A-202ENST00000625204 713 ntBASIC11.78□□□□□ -0.52
RIPPLY3P57055 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 AC099521.3-201ENST00000624251 2938 ntBASIC11.78□□□□□ -0.52
RIPPLY3P57055 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.78□□□□□ -0.52
RIPPLY3P57055 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RIPPLY3P57055 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms