Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.58□□□□□ -0.56
NKX2-1P43699 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.58□□□□□ -0.56
NKX2-1P43699 AC093726.1-201ENST00000608064 963 ntBASIC11.58□□□□□ -0.56
NKX2-1P43699 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.58□□□□□ -0.56
NKX2-1P43699 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.58□□□□□ -0.56
NKX2-1P43699 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.58□□□□□ -0.56
NKX2-1P43699 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 AL590824.1-201ENST00000403828 1349 ntBASIC11.58□□□□□ -0.56
NKX2-1P43699 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.58□□□□□ -0.56
NKX2-1P43699 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
NKX2-1P43699 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 AL021155.1-201ENST00000438808 2637 ntBASIC11.57□□□□□ -0.56
NKX2-1P43699 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.57□□□□□ -0.56
NKX2-1P43699 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
NKX2-1P43699 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
NKX2-1P43699 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.57□□□□□ -0.56
NKX2-1P43699 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
NKX2-1P43699 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 HMGA1P1-201ENST00000415560 1062 ntBASIC11.57□□□□□ -0.56
NKX2-1P43699 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.57□□□□□ -0.56
NKX2-1P43699 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.57□□□□□ -0.56
NKX2-1P43699 AC093433.1-201ENST00000458048 571 ntBASIC11.57□□□□□ -0.56
NKX2-1P43699 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.57□□□□□ -0.56
NKX2-1P43699 AC022137.2-201ENST00000503482 481 ntBASIC11.57□□□□□ -0.56
NKX2-1P43699 AC093004.1-201ENST00000508850 424 ntBASIC11.57□□□□□ -0.56
NKX2-1P43699 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.57□□□□□ -0.56
NKX2-1P43699 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.57□□□□□ -0.56
NKX2-1P43699 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.57□□□□□ -0.56
NKX2-1P43699 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 AC021016.3-201ENST00000608367 477 ntBASIC11.57□□□□□ -0.56
NKX2-1P43699 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 AC027601.3-201ENST00000622907 509 ntBASIC11.57□□□□□ -0.56
NKX2-1P43699 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
NKX2-1P43699 AC020917.4-201ENST00000623994 1999 ntBASIC11.57□□□□□ -0.56
NKX2-1P43699 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.57□□□□□ -0.56
NKX2-1P43699 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 AC022497.1-201ENST00000624916 3691 ntBASIC11.57□□□□□ -0.56
NKX2-1P43699 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.57□□□□□ -0.56
NKX2-1P43699 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.57□□□□□ -0.56
NKX2-1P43699 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms