Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC20.3■□□□□ 0.84
KDM5CP41229 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KDM5CP41229 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC20.3■□□□□ 0.84
KDM5CP41229 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 AL157832.2-205ENST00000597245 1649 ntBASIC20.3■□□□□ 0.84
KDM5CP41229 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC20.3■□□□□ 0.84
KDM5CP41229 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
KDM5CP41229 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC20.3■□□□□ 0.84
KDM5CP41229 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 GOLGA8DP-202ENST00000341390 2184 ntBASIC20.3■□□□□ 0.84
KDM5CP41229 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC20.3■□□□□ 0.84
KDM5CP41229 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC20.29■□□□□ 0.84
KDM5CP41229 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC20.29■□□□□ 0.84
KDM5CP41229 PIGCP1-201ENST00000527583 895 ntBASIC20.29■□□□□ 0.84
KDM5CP41229 AC120498.5-201ENST00000561757 299 ntBASIC20.29■□□□□ 0.84
KDM5CP41229 TLE2-205ENST00000586422 389 ntTSL 5 BASIC20.29■□□□□ 0.84
KDM5CP41229 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KDM5CP41229 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC20.29■□□□□ 0.84
KDM5CP41229 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC20.29■□□□□ 0.84
KDM5CP41229 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 STK25-235ENST00000543554 2556 ntTSL 2 BASIC20.29■□□□□ 0.84
KDM5CP41229 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 NME1-209ENST00000511355 1645 ntTSL 5 BASIC20.29■□□□□ 0.84
KDM5CP41229 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KDM5CP41229 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC20.29■□□□□ 0.84
KDM5CP41229 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC20.29■□□□□ 0.84
KDM5CP41229 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 ERG-211ENST00000453032 1595 ntTSL 2 BASIC20.29■□□□□ 0.84
KDM5CP41229 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC20.29■□□□□ 0.84
KDM5CP41229 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDM5CP41229 AC004910.1-201ENST00000433493 787 ntBASIC20.29■□□□□ 0.84
KDM5CP41229 RN7SL22P-201ENST00000471800 269 ntBASIC20.29■□□□□ 0.84
KDM5CP41229 RPL10P8-201ENST00000522888 313 ntBASIC20.29■□□□□ 0.84
KDM5CP41229 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC20.29■□□□□ 0.84
KDM5CP41229 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC20.29■□□□□ 0.84
KDM5CP41229 AC148476.1-201ENST00000622182 705 ntBASIC20.29■□□□□ 0.84
KDM5CP41229 AC061965.1-201ENST00000560524 1465 ntBASIC20.29■□□□□ 0.84
KDM5CP41229 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC20.29■□□□□ 0.84
KDM5CP41229 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC20.29■□□□□ 0.84
KDM5CP41229 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KDM5CP41229 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC20.28■□□□□ 0.84
KDM5CP41229 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
KDM5CP41229 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC20.28■□□□□ 0.84
KDM5CP41229 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC20.28■□□□□ 0.84
KDM5CP41229 CXXC1P1-202ENST00000489409 1212 ntBASIC20.28■□□□□ 0.84
KDM5CP41229 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC20.28■□□□□ 0.84
KDM5CP41229 PPY-202ENST00000587006 431 ntTSL 3 BASIC20.28■□□□□ 0.84
KDM5CP41229 Z82244.1-201ENST00000631502 840 ntBASIC20.28■□□□□ 0.84
KDM5CP41229 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KDM5CP41229 AC008038.1-201ENST00000634247 1314 ntBASIC20.28■□□□□ 0.84
KDM5CP41229 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM5CP41229 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC20.27■□□□□ 0.84
KDM5CP41229 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
KDM5CP41229 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC20.27■□□□□ 0.84
KDM5CP41229 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC20.27■□□□□ 0.84
KDM5CP41229 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 JPT2-203ENST00000382711 894 ntTSL 4 BASIC20.27■□□□□ 0.84
KDM5CP41229 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC20.27■□□□□ 0.84
KDM5CP41229 CACYBPP3-201ENST00000406011 625 ntBASIC20.27■□□□□ 0.84
KDM5CP41229 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC20.27■□□□□ 0.84
KDM5CP41229 BICD1P1-201ENST00000457832 1222 ntBASIC20.27■□□□□ 0.84
KDM5CP41229 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC20.27■□□□□ 0.84
KDM5CP41229 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC20.27■□□□□ 0.84
KDM5CP41229 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC20.27■□□□□ 0.84
KDM5CP41229 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC20.27■□□□□ 0.84
KDM5CP41229 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms