Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM23P36406 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRIM23P36406 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM23P36406 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM23P36406 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRIM23P36406 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM23P36406 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.8□□□□□ -0.2
TRIM23P36406 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM23P36406 AL928654.5-201ENST00000624831 2501 ntBASIC13.8□□□□□ -0.2
TRIM23P36406 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRIM23P36406 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM23P36406 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 KRT8P24-201ENST00000560290 1559 ntBASIC13.79□□□□□ -0.2
TRIM23P36406 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRIM23P36406 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.79□□□□□ -0.2
TRIM23P36406 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TRIM23P36406 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.79□□□□□ -0.2
TRIM23P36406 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.79□□□□□ -0.2
TRIM23P36406 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 AC079781.5-202ENST00000641784 3743 ntBASIC13.79□□□□□ -0.2
TRIM23P36406 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.79□□□□□ -0.2
TRIM23P36406 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRIM23P36406 AC006529.1-201ENST00000459978 637 ntBASIC13.79□□□□□ -0.2
TRIM23P36406 RN7SL375P-201ENST00000492442 298 ntBASIC13.79□□□□□ -0.2
TRIM23P36406 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.79□□□□□ -0.2
TRIM23P36406 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.79□□□□□ -0.2
TRIM23P36406 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.79□□□□□ -0.2
TRIM23P36406 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.79□□□□□ -0.2
TRIM23P36406 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRIM23P36406 AL031673.1-201ENST00000611460 466 ntBASIC13.79□□□□□ -0.2
TRIM23P36406 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRIM23P36406 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.79□□□□□ -0.2
TRIM23P36406 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRIM23P36406 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRIM23P36406 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRIM23P36406 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.79□□□□□ -0.2
TRIM23P36406 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM23P36406 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TRIM23P36406 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRIM23P36406 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM23P36406 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM23P36406 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM23P36406 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM23P36406 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRIM23P36406 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM23P36406 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM23P36406 EEF1DP2-201ENST00000433698 843 ntBASIC13.78□□□□□ -0.2
TRIM23P36406 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.78□□□□□ -0.2
TRIM23P36406 AC025186.1-201ENST00000478174 870 ntBASIC13.78□□□□□ -0.2
TRIM23P36406 RN7SL23P-201ENST00000484055 275 ntBASIC13.78□□□□□ -0.2
TRIM23P36406 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM23P36406 AL132994.1-201ENST00000554098 400 ntBASIC13.78□□□□□ -0.2
TRIM23P36406 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM23P36406 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM23P36406 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM23P36406 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
TRIM23P36406 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM23P36406 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRIM23P36406 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRIM23P36406 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms