Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.88□□□□□ -0.03
CHRNA3P32297 AC021016.3-201ENST00000608367 477 ntBASIC14.88□□□□□ -0.03
CHRNA3P32297 AC090164.2-201ENST00000611487 516 ntBASIC14.88□□□□□ -0.03
CHRNA3P32297 AL136295.7-201ENST00000619226 1200 ntBASIC14.88□□□□□ -0.03
CHRNA3P32297 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CHRNA3P32297 Z98259.2-201ENST00000641583 609 ntBASIC14.88□□□□□ -0.03
CHRNA3P32297 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNA3P32297 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CHRNA3P32297 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CHRNA3P32297 AC061965.1-201ENST00000560524 1465 ntBASIC14.88□□□□□ -0.03
CHRNA3P32297 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA3P32297 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA3P32297 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CHRNA3P32297 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CHRNA3P32297 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CHRNA3P32297 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 TMBIM7P-202ENST00000641474 1516 ntBASIC14.87□□□□□ -0.03
CHRNA3P32297 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CHRNA3P32297 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.87□□□□□ -0.03
CHRNA3P32297 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CHRNA3P32297 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.87□□□□□ -0.03
CHRNA3P32297 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.87□□□□□ -0.03
CHRNA3P32297 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.87□□□□□ -0.03
CHRNA3P32297 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.87□□□□□ -0.03
CHRNA3P32297 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 AC005962.1-201ENST00000584100 773 ntBASIC14.87□□□□□ -0.03
CHRNA3P32297 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 AC008805.1-201ENST00000590892 364 ntBASIC14.87□□□□□ -0.03
CHRNA3P32297 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.87□□□□□ -0.03
CHRNA3P32297 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.87□□□□□ -0.03
CHRNA3P32297 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 AL445250.1-201ENST00000641671 2259 ntBASIC14.87□□□□□ -0.03
CHRNA3P32297 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHRNA3P32297 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA3P32297 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA3P32297 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CHRNA3P32297 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNA3P32297 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRNA3P32297 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA3P32297 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHRNA3P32297 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRNA3P32297 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms