Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.11□□□□□ -0.47
CD40P25942 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.11□□□□□ -0.47
CD40P25942 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CD40P25942 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CD40P25942 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 RCC2P1-201ENST00000452257 1476 ntBASIC12.11□□□□□ -0.47
CD40P25942 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CD40P25942 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.11□□□□□ -0.47
CD40P25942 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.11□□□□□ -0.47
CD40P25942 AC004837.1-201ENST00000446267 564 ntBASIC12.11□□□□□ -0.47
CD40P25942 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.11□□□□□ -0.47
CD40P25942 COQ10BP2-201ENST00000513804 724 ntBASIC12.11□□□□□ -0.47
CD40P25942 RNA5SP406-201ENST00000516106 112 ntBASIC12.11□□□□□ -0.47
CD40P25942 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.11□□□□□ -0.47
CD40P25942 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CD40P25942 MIR4750-201ENST00000584564 56 ntBASIC12.11□□□□□ -0.47
CD40P25942 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
CD40P25942 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.11□□□□□ -0.47
CD40P25942 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.11□□□□□ -0.47
CD40P25942 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CD40P25942 AL136379.1-201ENST00000623471 2642 ntBASIC12.11□□□□□ -0.47
CD40P25942 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.11□□□□□ -0.47
CD40P25942 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.11□□□□□ -0.47
CD40P25942 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.11□□□□□ -0.47
CD40P25942 AC007191.1-201ENST00000623179 2995 ntBASIC12.11□□□□□ -0.47
CD40P25942 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CD40P25942 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.11□□□□□ -0.47
CD40P25942 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CD40P25942 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CD40P25942 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD40P25942 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.1□□□□□ -0.47
CD40P25942 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.1□□□□□ -0.47
CD40P25942 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 AC061965.1-201ENST00000560524 1465 ntBASIC12.1□□□□□ -0.47
CD40P25942 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
CD40P25942 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.1□□□□□ -0.47
CD40P25942 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 RNVU1-8-201ENST00000364272 125 ntBASIC12.1□□□□□ -0.47
CD40P25942 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CD40P25942 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.1□□□□□ -0.47
CD40P25942 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.1□□□□□ -0.47
CD40P25942 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CD40P25942 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.1□□□□□ -0.47
CD40P25942 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CD40P25942 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.1□□□□□ -0.47
CD40P25942 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.1□□□□□ -0.47
CD40P25942 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.1□□□□□ -0.47
CD40P25942 AC105137.3-201ENST00000617588 984 ntBASIC12.1□□□□□ -0.47
CD40P25942 AC091769.1-201ENST00000619576 568 ntBASIC12.1□□□□□ -0.47
CD40P25942 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.1□□□□□ -0.47
CD40P25942 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.1□□□□□ -0.47
CD40P25942 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
CD40P25942 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 IL9RP3-201ENST00000442856 1674 ntBASIC12.1□□□□□ -0.47
CD40P25942 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD40P25942 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CD40P25942 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.09□□□□□ -0.47
CD40P25942 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.09□□□□□ -0.47
CD40P25942 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.09□□□□□ -0.47
CD40P25942 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.09□□□□□ -0.47
CD40P25942 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms