Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NFKB1P19838 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.31□□□□□ -0.12
NFKB1P19838 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.31□□□□□ -0.12
NFKB1P19838 AC099548.2-209ENST00000480264 625 ntBASIC14.31□□□□□ -0.12
NFKB1P19838 SCARNA20.5-201ENST00000516991 142 ntBASIC14.31□□□□□ -0.12
NFKB1P19838 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.31□□□□□ -0.12
NFKB1P19838 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.31□□□□□ -0.12
NFKB1P19838 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.31□□□□□ -0.12
NFKB1P19838 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.31□□□□□ -0.12
NFKB1P19838 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.31□□□□□ -0.12
NFKB1P19838 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
NFKB1P19838 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 AL359845.1-201ENST00000458202 1648 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.3□□□□□ -0.12
NFKB1P19838 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NFKB1P19838 AC020658.7-201ENST00000624274 2442 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NFKB1P19838 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.3□□□□□ -0.12
NFKB1P19838 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
NFKB1P19838 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
NFKB1P19838 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 BX679664.3-201ENST00000414070 555 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NFKB1P19838 FNTAP2-201ENST00000430308 634 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.3□□□□□ -0.12
NFKB1P19838 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NFKB1P19838 SPTLC1P5-201ENST00000450718 252 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 BX284668.4-201ENST00000453917 508 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 KRT8P13-201ENST00000463294 1010 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 AC113935.1-201ENST00000471722 555 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 HIST2H2BC-201ENST00000498492 580 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.3□□□□□ -0.12
NFKB1P19838 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.3□□□□□ -0.12
NFKB1P19838 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.3□□□□□ -0.12
NFKB1P19838 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NFKB1P19838 AL021707.6-201ENST00000609212 491 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 AC079336.7-201ENST00000623428 1078 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 AC244452.3-201ENST00000636814 210 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NFKB1P19838 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 CR383656.2-201ENST00000548656 2254 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 AC009474.1-201ENST00000455096 1565 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
NFKB1P19838 PPT1-213ENST00000641319 2388 ntBASIC14.3□□□□□ -0.12
NFKB1P19838 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFKB1P19838 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NFKB1P19838 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms