Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 CICP16-201ENST00000502609 2813 ntBASIC16.3■□□□□ 0.2
ERCC3P19447 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC3P19447 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 LINC00115-201ENST00000473798 1317 ntBASIC16.3■□□□□ 0.2
ERCC3P19447 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ERCC3P19447 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.3■□□□□ 0.2
ERCC3P19447 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.3■□□□□ 0.2
ERCC3P19447 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC3P19447 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC3P19447 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ERCC3P19447 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC3P19447 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC3P19447 AC093909.3-201ENST00000504783 336 ntBASIC16.3■□□□□ 0.2
ERCC3P19447 AC005740.1-201ENST00000515639 522 ntBASIC16.3■□□□□ 0.2
ERCC3P19447 AC226150.1-201ENST00000544259 466 ntBASIC16.3■□□□□ 0.2
ERCC3P19447 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC3P19447 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.3■□□□□ 0.2
ERCC3P19447 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC3P19447 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC3P19447 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ERCC3P19447 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC3P19447 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 AC041040.2-201ENST00000622926 2899 ntBASIC16.3■□□□□ 0.2
ERCC3P19447 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ERCC3P19447 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC3P19447 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC3P19447 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ERCC3P19447 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC3P19447 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC3P19447 AC025183.3-201ENST00000623526 1482 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ERCC3P19447 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ERCC3P19447 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.29■□□□□ 0.2
ERCC3P19447 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ERCC3P19447 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC3P19447 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.29■□□□□ 0.2
ERCC3P19447 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ERCC3P19447 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 BX679664.3-201ENST00000414070 555 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 PPP1R2P4-201ENST00000424051 595 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 GCSHP3-201ENST00000431120 391 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 AC024293.1-201ENST00000467930 498 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 AC113935.1-201ENST00000471722 555 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 AC010234.1-201ENST00000494599 870 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC3P19447 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.29■□□□□ 0.2
ERCC3P19447 KLF17P1-201ENST00000547105 1126 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 AC145285.5-201ENST00000562217 361 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.29■□□□□ 0.2
ERCC3P19447 AC011471.3-201ENST00000623576 402 ntBASIC16.29■□□□□ 0.2
ERCC3P19447 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.29■□□□□ 0.2
ERCC3P19447 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC3P19447 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC3P19447 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ERCC3P19447 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC3P19447 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC3P19447 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC3P19447 AC015802.1-201ENST00000588104 1449 ntBASIC16.28■□□□□ 0.2
ERCC3P19447 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.28■□□□□ 0.2
ERCC3P19447 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC3P19447 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC3P19447 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC3P19447 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ERCC3P19447 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms