Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PKHD1P08F94 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC8.57□□□□□ -1.04
PKHD1P08F94 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 USP17L6P-201ENST00000382470 1197 ntBASIC8.57□□□□□ -1.04
PKHD1P08F94 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC8.57□□□□□ -1.04
PKHD1P08F94 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC8.57□□□□□ -1.04
PKHD1P08F94 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC8.57□□□□□ -1.04
PKHD1P08F94 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 AC099795.2-201ENST00000639582 440 ntBASIC8.57□□□□□ -1.04
PKHD1P08F94 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 LINC00638-201ENST00000555578 2518 ntBASIC8.57□□□□□ -1.04
PKHD1P08F94 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 AC007312.1-201ENST00000427493 258 ntBASIC8.57□□□□□ -1.04
PKHD1P08F94 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC8.57□□□□□ -1.04
PKHD1P08F94 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC8.57□□□□□ -1.04
PKHD1P08F94 MIR3940-201ENST00000579148 102 ntBASIC8.57□□□□□ -1.04
PKHD1P08F94 WSB1-213ENST00000583193 552 ntTSL 4 BASIC8.57□□□□□ -1.04
PKHD1P08F94 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC8.57□□□□□ -1.04
PKHD1P08F94 PIGA-209ENST00000634582 965 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 AC073488.1-201ENST00000416620 1600 ntBASIC8.57□□□□□ -1.04
PKHD1P08F94 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
PKHD1P08F94 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
PKHD1P08F94 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
PKHD1P08F94 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC8.56□□□□□ -1.04
PKHD1P08F94 AC012358.2-201ENST00000430010 1434 ntBASIC8.56□□□□□ -1.04
PKHD1P08F94 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC8.56□□□□□ -1.04
PKHD1P08F94 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC8.56□□□□□ -1.04
PKHD1P08F94 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC8.56□□□□□ -1.04
PKHD1P08F94 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC8.56□□□□□ -1.04
PKHD1P08F94 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC8.56□□□□□ -1.04
PKHD1P08F94 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC8.56□□□□□ -1.04
PKHD1P08F94 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC8.56□□□□□ -1.04
PKHD1P08F94 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC8.56□□□□□ -1.04
PKHD1P08F94 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
PKHD1P08F94 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC8.56□□□□□ -1.04
PKHD1P08F94 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
PKHD1P08F94 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
PKHD1P08F94 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 SNORD23-201ENST00000408876 110 ntBASIC8.56□□□□□ -1.04
PKHD1P08F94 RPS15P5-201ENST00000449885 432 ntBASIC8.56□□□□□ -1.04
PKHD1P08F94 MIR4526-201ENST00000583168 87 ntBASIC8.56□□□□□ -1.04
PKHD1P08F94 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC8.56□□□□□ -1.04
PKHD1P08F94 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC8.56□□□□□ -1.04
PKHD1P08F94 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC8.56□□□□□ -1.04
PKHD1P08F94 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
PKHD1P08F94 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
PKHD1P08F94 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
PKHD1P08F94 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
PKHD1P08F94 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC8.56□□□□□ -1.04
PKHD1P08F94 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PKHD1P08F94 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms