Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.16□□□□□ -0.14
RFPL1O75677 AL451050.2-201ENST00000606967 682 ntBASIC14.16□□□□□ -0.14
RFPL1O75677 AC007663.3-201ENST00000609632 465 ntBASIC14.16□□□□□ -0.14
RFPL1O75677 AC138649.2-201ENST00000615886 705 ntBASIC14.16□□□□□ -0.14
RFPL1O75677 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.16□□□□□ -0.14
RFPL1O75677 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RFPL1O75677 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
RFPL1O75677 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 AC020917.4-201ENST00000623994 1999 ntBASIC14.16□□□□□ -0.14
RFPL1O75677 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RFPL1O75677 AL590824.1-201ENST00000403828 1349 ntBASIC14.15□□□□□ -0.14
RFPL1O75677 AC018735.1-201ENST00000437208 1502 ntBASIC14.15□□□□□ -0.14
RFPL1O75677 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.15□□□□□ -0.14
RFPL1O75677 AC104758.3-203ENST00000562938 2123 ntBASIC14.15□□□□□ -0.14
RFPL1O75677 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.15□□□□□ -0.14
RFPL1O75677 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RFPL1O75677 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RFPL1O75677 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RFPL1O75677 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
RFPL1O75677 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.15□□□□□ -0.14
RFPL1O75677 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.15□□□□□ -0.14
RFPL1O75677 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RFPL1O75677 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.15□□□□□ -0.14
RFPL1O75677 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
RFPL1O75677 AC138627.1-207ENST00000641560 1006 ntBASIC14.15□□□□□ -0.14
RFPL1O75677 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.15□□□□□ -0.14
RFPL1O75677 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RFPL1O75677 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.15□□□□□ -0.14
RFPL1O75677 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RFPL1O75677 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RFPL1O75677 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFPL1O75677 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.15□□□□□ -0.14
RFPL1O75677 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.14□□□□□ -0.15
RFPL1O75677 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RFPL1O75677 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RFPL1O75677 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 MEX3B-202ENST00000558133 4333 ntBASIC14.14□□□□□ -0.15
RFPL1O75677 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.14□□□□□ -0.15
RFPL1O75677 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RFPL1O75677 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.14□□□□□ -0.15
RFPL1O75677 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.14□□□□□ -0.15
RFPL1O75677 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 MIR769-201ENST00000390225 118 ntBASIC14.14□□□□□ -0.15
RFPL1O75677 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.14□□□□□ -0.15
RFPL1O75677 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.14□□□□□ -0.15
RFPL1O75677 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.14□□□□□ -0.15
RFPL1O75677 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.14□□□□□ -0.15
RFPL1O75677 AC100850.1-201ENST00000506768 649 ntBASIC14.14□□□□□ -0.15
RFPL1O75677 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.14□□□□□ -0.15
RFPL1O75677 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
RFPL1O75677 AC105129.2-201ENST00000559536 390 ntBASIC14.14□□□□□ -0.15
RFPL1O75677 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.14□□□□□ -0.15
RFPL1O75677 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.14□□□□□ -0.15
RFPL1O75677 AC016629.1-201ENST00000596579 586 ntBASIC14.14□□□□□ -0.15
RFPL1O75677 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RFPL1O75677 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.14□□□□□ -0.15
RFPL1O75677 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFPL1O75677 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms