Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 OR8T1P-201ENST00000421347 918 ntBASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 AC130709.1-201ENST00000484779 1212 ntBASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 MRPL22P1-201ENST00000505398 616 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 AC138701.2-201ENST00000553634 226 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 MIR3180-2-201ENST00000581748 88 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 RPL17P45-201ENST00000586289 509 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 AC107464.3-201ENST00000609172 737 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 AP001065.2-201ENST00000617205 644 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 MEX3B-202ENST00000558133 4333 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 REXO1L1P-201ENST00000379010 6598 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 TEKT4P2-202ENST00000559466 1312 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 GRK6P1-201ENST00000400595 1711 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 OR2I1P-208ENST00000641137 4948 ntBASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NPIPA3F8WFD2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms