Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 AC011474.4-201ENST00000623523 2076 ntBASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 RHPN1-AS1-201ENST00000518049 1918 ntBASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 MED15P3-201ENST00000413613 326 ntBASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 AL773545.2-201ENST00000442149 472 ntBASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 NF1P11-201ENST00000621292 1282 ntBASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHANK2Q9UPX8 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 AP000533.1-201ENST00000456143 1177 ntBASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 RN7SKP255-201ENST00000363442 313 ntBASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 RN7SKP203-201ENST00000363618 332 ntBASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 RN7SKP71-201ENST00000364558 318 ntBASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 7SK.1-201ENST00000365328 331 ntBASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 MIR611-201ENST00000384869 67 ntBASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 AL391647.1-201ENST00000395664 511 ntBASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 CDK4P1-201ENST00000454213 828 ntBASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 ALG1L15P-201ENST00000482834 794 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms