Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 LDHBP1-201ENST00000455730 1119 ntBASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 AP000322.3-201ENST00000608665 388 ntBASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 AL161773.1-201ENST00000624845 863 ntBASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20BQ9P0W2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 AC253536.4-201ENST00000440539 267 ntBASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 KRT8P2-201ENST00000556193 944 ntBASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 SBF1P1-201ENST00000444527 5631 ntBASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 ODCP-201ENST00000459650 1639 ntBASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 AC015909.5-201ENST00000624336 2266 ntBASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 AC004554.1-201ENST00000422830 1468 ntBASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 RCC2P1-201ENST00000452257 1476 ntBASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMG20BQ9P0W2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 RNVU1-8-201ENST00000364272 125 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 AC092573.1-201ENST00000433054 884 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 LYPLA2P1-203ENST00000447689 696 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 GRPEL2P1-201ENST00000453145 339 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms