Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 TUBB8P4-201ENST00000511806 1324 ntBASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 U3.5-201ENST00000363448 216 ntBASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 AC136604.1-202ENST00000425471 771 ntBASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 RPS18P9-201ENST00000482817 460 ntBASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 AC113385.2-201ENST00000614465 762 ntBASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 MIR6816-201ENST00000620368 66 ntBASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRMT13Q9NUP7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 AC097359.2-201ENST00000604992 2389 ntBASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRMT13Q9NUP7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 Z98885.3-201ENST00000624882 1757 ntBASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 GGTLC4P-201ENST00000402176 664 ntBASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 SERBP1P2-201ENST00000436888 1164 ntBASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 AC010531.8-201ENST00000623341 685 ntBASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 CASP16P-204ENST00000635032 809 ntBASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRMT13Q9NUP7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRMT13Q9NUP7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRMT13Q9NUP7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRMT13Q9NUP7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.25■□□□□ 0.03
TRMT13Q9NUP7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRMT13Q9NUP7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRMT13Q9NUP7 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRMT13Q9NUP7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRMT13Q9NUP7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRMT13Q9NUP7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms