Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 PSMD4P1-201ENST00000433951 1109 ntBASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 NDUFB10P1-201ENST00000567319 521 ntBASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPAP1Q9BWH6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 AL591122.2-201ENST00000624125 1853 ntBASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 AC067931.2-201ENST00000623655 2003 ntBASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 RN7SL357P-201ENST00000581065 298 ntBASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 KRT18P8-201ENST00000581937 1246 ntBASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 AC002044.2-201ENST00000624910 970 ntBASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPAP1Q9BWH6 MARK2P9-201ENST00000430958 1727 ntBASIC16.96■□□□□ 0.3
RPAP1Q9BWH6 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPAP1Q9BWH6 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RPAP1Q9BWH6 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPAP1Q9BWH6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RPAP1Q9BWH6 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
RPAP1Q9BWH6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 AC026410.1-201ENST00000507366 1101 ntBASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 AC141586.1-203ENST00000567242 366 ntBASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.95■□□□□ 0.3
RPAP1Q9BWH6 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms