Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RN7SL48P-201ENST00000579283 293 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 GHET1-201ENST00000627071 1906 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 AC005014.1-201ENST00000432006 2976 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 AGGF1P10-201ENST00000635005 2191 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 AL590440.2-201ENST00000641973 1595 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 AC011481.3-201ENST00000623895 5594 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 AC015819.3-201ENST00000624305 2674 ntBASIC12.55□□□□□ -0.4
RFT1Q96AA3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 AL355864.2-201ENST00000447420 863 ntBASIC12.55□□□□□ -0.4
RFT1Q96AA3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 OR10B1P-201ENST00000601666 907 ntBASIC12.55□□□□□ -0.4
RFT1Q96AA3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 ABCD1P2-201ENST00000429313 1601 ntBASIC12.55□□□□□ -0.4
RFT1Q96AA3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFT1Q96AA3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RFT1Q96AA3 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms