Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
IRX4P78413 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 SALL4P5-201ENST00000419001 1760 ntBASIC14.79□□□□□ -0.04
IRX4P78413 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 AC078991.1-201ENST00000437297 610 ntBASIC14.79□□□□□ -0.04
IRX4P78413 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
IRX4P78413 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.79□□□□□ -0.04
IRX4P78413 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.79□□□□□ -0.04
IRX4P78413 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 DUX4L46-201ENST00000566845 751 ntBASIC14.79□□□□□ -0.04
IRX4P78413 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.79□□□□□ -0.04
IRX4P78413 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.79□□□□□ -0.04
IRX4P78413 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 AL132994.2-201ENST00000603120 687 ntBASIC14.79□□□□□ -0.04
IRX4P78413 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.79□□□□□ -0.04
IRX4P78413 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
IRX4P78413 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.79□□□□□ -0.04
IRX4P78413 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
IRX4P78413 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.79□□□□□ -0.04
IRX4P78413 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IRX4P78413 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
IRX4P78413 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
IRX4P78413 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
IRX4P78413 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
IRX4P78413 SHC1P1-201ENST00000425230 1745 ntBASIC14.78□□□□□ -0.04
IRX4P78413 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
IRX4P78413 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
IRX4P78413 E2F3P2-201ENST00000447755 1422 ntBASIC14.78□□□□□ -0.04
IRX4P78413 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
IRX4P78413 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 AL136172.1-201ENST00000598590 1394 ntBASIC14.78□□□□□ -0.04
IRX4P78413 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
IRX4P78413 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
IRX4P78413 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.78□□□□□ -0.04
IRX4P78413 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.78□□□□□ -0.04
IRX4P78413 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.78□□□□□ -0.04
IRX4P78413 AL627231.1-201ENST00000394467 1125 ntBASIC14.78□□□□□ -0.04
IRX4P78413 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.78□□□□□ -0.04
IRX4P78413 RPL13AP19-201ENST00000434320 584 ntBASIC14.78□□□□□ -0.04
IRX4P78413 RCC2P8-201ENST00000502779 1035 ntBASIC14.78□□□□□ -0.04
IRX4P78413 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 MIR4754-201ENST00000582477 89 ntBASIC14.78□□□□□ -0.04
IRX4P78413 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
IRX4P78413 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.78□□□□□ -0.04
IRX4P78413 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
IRX4P78413 AC011498.7-201ENST00000624986 2027 ntBASIC14.78□□□□□ -0.04
IRX4P78413 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.78□□□□□ -0.04
IRX4P78413 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms