Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SKP1P63208 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SKP1P63208 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.41□□□□□ -0.26
SKP1P63208 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.41□□□□□ -0.26
SKP1P63208 OR8T1P-201ENST00000421347 918 ntBASIC13.41□□□□□ -0.26
SKP1P63208 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.41□□□□□ -0.26
SKP1P63208 AC234782.1-201ENST00000451950 919 ntBASIC13.41□□□□□ -0.26
SKP1P63208 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.41□□□□□ -0.26
SKP1P63208 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
SKP1P63208 SLC25A15P3-201ENST00000505530 290 ntBASIC13.41□□□□□ -0.26
SKP1P63208 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.41□□□□□ -0.26
SKP1P63208 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.41□□□□□ -0.26
SKP1P63208 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.41□□□□□ -0.26
SKP1P63208 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SKP1P63208 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.41□□□□□ -0.26
SKP1P63208 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.41□□□□□ -0.26
SKP1P63208 NDUFB10P1-201ENST00000567319 521 ntBASIC13.41□□□□□ -0.26
SKP1P63208 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SKP1P63208 CR392039.2-201ENST00000623182 509 ntBASIC13.41□□□□□ -0.26
SKP1P63208 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.41□□□□□ -0.26
SKP1P63208 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SKP1P63208 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.41□□□□□ -0.26
SKP1P63208 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 RCC2P1-201ENST00000452257 1476 ntBASIC13.41□□□□□ -0.26
SKP1P63208 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.41□□□□□ -0.26
SKP1P63208 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SKP1P63208 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.4□□□□□ -0.26
SKP1P63208 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.4□□□□□ -0.26
SKP1P63208 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.4□□□□□ -0.26
SKP1P63208 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SKP1P63208 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SKP1P63208 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.4□□□□□ -0.26
SKP1P63208 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SKP1P63208 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.4□□□□□ -0.26
SKP1P63208 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.4□□□□□ -0.26
SKP1P63208 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.4□□□□□ -0.26
SKP1P63208 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.4□□□□□ -0.26
SKP1P63208 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.4□□□□□ -0.26
SKP1P63208 FGFR3P5-201ENST00000564496 886 ntBASIC13.4□□□□□ -0.26
SKP1P63208 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.4□□□□□ -0.26
SKP1P63208 RN7SL665P-201ENST00000578793 300 ntBASIC13.4□□□□□ -0.26
SKP1P63208 RN7SL574P-201ENST00000581512 297 ntBASIC13.4□□□□□ -0.26
SKP1P63208 SIGLEC22P-201ENST00000599104 714 ntBASIC13.4□□□□□ -0.26
SKP1P63208 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.4□□□□□ -0.26
SKP1P63208 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.4□□□□□ -0.26
SKP1P63208 AL133467.4-201ENST00000602953 725 ntBASIC13.4□□□□□ -0.26
SKP1P63208 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.4□□□□□ -0.26
SKP1P63208 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.4□□□□□ -0.26
SKP1P63208 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.4□□□□□ -0.26
SKP1P63208 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.4□□□□□ -0.26
SKP1P63208 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.4□□□□□ -0.26
SKP1P63208 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.4□□□□□ -0.26
SKP1P63208 AC073957.3-201ENST00000609998 6758 ntBASIC13.4□□□□□ -0.26
SKP1P63208 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SKP1P63208 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SKP1P63208 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SKP1P63208 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SKP1P63208 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
SKP1P63208 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.27
SKP1P63208 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.39□□□□□ -0.27
SKP1P63208 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms