Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
UBA52P62987 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
UBA52P62987 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
UBA52P62987 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.29□□□□□ -0.44
UBA52P62987 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.29□□□□□ -0.44
UBA52P62987 AC136604.1-202ENST00000425471 771 ntBASIC12.29□□□□□ -0.44
UBA52P62987 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.29□□□□□ -0.44
UBA52P62987 AC114812.1-204ENST00000449669 728 ntBASIC12.29□□□□□ -0.44
UBA52P62987 AC005077.2-201ENST00000449786 690 ntBASIC12.29□□□□□ -0.44
UBA52P62987 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.29□□□□□ -0.44
UBA52P62987 BX284668.4-201ENST00000453917 508 ntBASIC12.29□□□□□ -0.44
UBA52P62987 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.29□□□□□ -0.44
UBA52P62987 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
UBA52P62987 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
UBA52P62987 AL662890.1-201ENST00000396818 632 ntBASIC12.28□□□□□ -0.44
UBA52P62987 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 NUS1P3-201ENST00000423502 862 ntBASIC12.28□□□□□ -0.44
UBA52P62987 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.28□□□□□ -0.44
UBA52P62987 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.28□□□□□ -0.44
UBA52P62987 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.28□□□□□ -0.44
UBA52P62987 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.28□□□□□ -0.44
UBA52P62987 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.28□□□□□ -0.44
UBA52P62987 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.28□□□□□ -0.44
UBA52P62987 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.28□□□□□ -0.44
UBA52P62987 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.28□□□□□ -0.44
UBA52P62987 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.28□□□□□ -0.44
UBA52P62987 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.28□□□□□ -0.44
UBA52P62987 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.28□□□□□ -0.44
UBA52P62987 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.28□□□□□ -0.44
UBA52P62987 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.28□□□□□ -0.44
UBA52P62987 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBA52P62987 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms