Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDKN2DP55273 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.89□□□□□ -0.19
CDKN2DP55273 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.89□□□□□ -0.19
CDKN2DP55273 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CDKN2DP55273 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.89□□□□□ -0.19
CDKN2DP55273 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.89□□□□□ -0.19
CDKN2DP55273 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.89□□□□□ -0.19
CDKN2DP55273 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.89□□□□□ -0.19
CDKN2DP55273 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.89□□□□□ -0.19
CDKN2DP55273 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 AC004898.1-201ENST00000451057 766 ntBASIC13.89□□□□□ -0.19
CDKN2DP55273 DUX4L50-201ENST00000455245 715 ntBASIC13.89□□□□□ -0.19
CDKN2DP55273 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.89□□□□□ -0.19
CDKN2DP55273 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.89□□□□□ -0.19
CDKN2DP55273 AC026740.1-201ENST00000607068 791 ntBASIC13.89□□□□□ -0.19
CDKN2DP55273 AL161773.1-201ENST00000624845 863 ntBASIC13.89□□□□□ -0.19
CDKN2DP55273 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.89□□□□□ -0.19
CDKN2DP55273 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDKN2DP55273 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
CDKN2DP55273 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.89□□□□□ -0.19
CDKN2DP55273 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.89□□□□□ -0.19
CDKN2DP55273 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDKN2DP55273 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDKN2DP55273 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.89□□□□□ -0.19
CDKN2DP55273 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.89□□□□□ -0.19
CDKN2DP55273 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2DP55273 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CDKN2DP55273 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2DP55273 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2DP55273 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2DP55273 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2DP55273 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2DP55273 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CDKN2DP55273 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2DP55273 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2DP55273 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.88□□□□□ -0.19
CDKN2DP55273 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.88□□□□□ -0.19
CDKN2DP55273 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2DP55273 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2DP55273 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2DP55273 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2DP55273 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2DP55273 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2DP55273 ALG1L13P-202ENST00000519320 584 ntBASIC13.88□□□□□ -0.19
CDKN2DP55273 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2DP55273 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2DP55273 KRT8P1-201ENST00000557533 1207 ntBASIC13.88□□□□□ -0.19
CDKN2DP55273 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2DP55273 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2DP55273 AL645939.5-201ENST00000606834 243 ntBASIC13.88□□□□□ -0.19
CDKN2DP55273 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2DP55273 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2DP55273 AC015909.3-201ENST00000572855 1794 ntBASIC13.88□□□□□ -0.19
CDKN2DP55273 Z98885.3-201ENST00000624882 1757 ntBASIC13.88□□□□□ -0.19
CDKN2DP55273 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms