Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC11.9□□□□□ -0.51
NKX2-5P52952 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
NKX2-5P52952 LINC00473-205ENST00000584911 2212 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
NKX2-5P52952 FERMT1-204ENST00000536936 3229 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
NKX2-5P52952 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
NKX2-5P52952 WARS-202ENST00000355338 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NKX2-5P52952 FAM84A-202ENST00000331243 3765 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
NKX2-5P52952 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-5P52952 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-5P52952 USP10-219ENST00000570191 2717 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-5P52952 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-5P52952 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 ANKRD20A7P-201ENST00000402318 2414 ntBASIC11.89□□□□□ -0.51
NKX2-5P52952 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.89□□□□□ -0.51
NKX2-5P52952 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-5P52952 PMS2P2-201ENST00000425039 1128 ntBASIC11.89□□□□□ -0.51
NKX2-5P52952 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.89□□□□□ -0.51
NKX2-5P52952 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.89□□□□□ -0.51
NKX2-5P52952 AP000867.3-201ENST00000524675 377 ntBASIC11.89□□□□□ -0.51
NKX2-5P52952 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.89□□□□□ -0.51
NKX2-5P52952 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
NKX2-5P52952 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
NKX2-5P52952 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NKX2-5P52952 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.89□□□□□ -0.51
NKX2-5P52952 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.89□□□□□ -0.51
NKX2-5P52952 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 AL031846.2-201ENST00000624656 3671 ntBASIC11.89□□□□□ -0.51
NKX2-5P52952 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.89□□□□□ -0.51
NKX2-5P52952 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 AL158070.2-201ENST00000623713 1621 ntBASIC11.89□□□□□ -0.51
NKX2-5P52952 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 ITGB8-205ENST00000537992 3420 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-5P52952 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-5P52952 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-5P52952 AC003102.2-201ENST00000589195 1469 ntBASIC11.89□□□□□ -0.51
NKX2-5P52952 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NKX2-5P52952 AVIL-201ENST00000257861 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-5P52952 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
NKX2-5P52952 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX2-5P52952 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
NKX2-5P52952 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX2-5P52952 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX2-5P52952 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 STX16-205ENST00000361830 4318 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX2-5P52952 ESPNL-206ENST00000612395 3673 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 MARK3-201ENST00000216288 2911 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX2-5P52952 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX2-5P52952 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NKX2-5P52952 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
NKX2-5P52952 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
NKX2-5P52952 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
NKX2-5P52952 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 AL031133.1-201ENST00000406807 723 ntBASIC11.88□□□□□ -0.51
NKX2-5P52952 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.88□□□□□ -0.51
NKX2-5P52952 TMPOP1-202ENST00000424642 1267 ntBASIC11.88□□□□□ -0.51
NKX2-5P52952 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.88□□□□□ -0.51
NKX2-5P52952 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX2-5P52952 KRT18P43-201ENST00000469825 1281 ntBASIC11.88□□□□□ -0.51
NKX2-5P52952 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-5P52952 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.88□□□□□ -0.51
NKX2-5P52952 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms