Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.1■□□□□ 0.33
PDE6BP35913 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 PKD1P5-201ENST00000532415 10291 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6BP35913 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PDE6BP35913 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PDE6BP35913 MIR632-201ENST00000385193 94 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 AL121949.3-201ENST00000406684 385 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 KRT18P44-201ENST00000416086 1285 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC17.09■□□□□ 0.33
PDE6BP35913 DPY19L2P4-201ENST00000479881 442 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 AC099328.1-201ENST00000498809 1030 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 AC026412.1-206ENST00000502273 206 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 SRPK2P-201ENST00000523408 1100 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC17.09■□□□□ 0.33
PDE6BP35913 AP000920.1-201ENST00000531824 344 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6BP35913 AC137723.2-201ENST00000623540 398 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 TUBB8P4-201ENST00000511806 1324 ntBASIC17.09■□□□□ 0.33
PDE6BP35913 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC17.09■□□□□ 0.33
PDE6BP35913 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PDE6BP35913 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6BP35913 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6BP35913 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6BP35913 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PDE6BP35913 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6BP35913 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.08■□□□□ 0.33
PDE6BP35913 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6BP35913 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PDE6BP35913 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6BP35913 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC17.08■□□□□ 0.33
PDE6BP35913 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6BP35913 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6BP35913 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PDE6BP35913 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE6BP35913 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PDE6BP35913 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC17.08■□□□□ 0.32
PDE6BP35913 AC007279.1-201ENST00000448547 837 ntBASIC17.08■□□□□ 0.32
PDE6BP35913 RHOQP2-201ENST00000449922 579 ntBASIC17.08■□□□□ 0.32
PDE6BP35913 GYG1-209ENST00000483267 801 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE6BP35913 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC17.08■□□□□ 0.32
PDE6BP35913 IGHVII-74-1-201ENST00000517572 241 ntBASIC17.08■□□□□ 0.32
PDE6BP35913 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC17.08■□□□□ 0.32
PDE6BP35913 CTBP2P6-201ENST00000526402 1229 ntBASIC17.08■□□□□ 0.32
PDE6BP35913 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE6BP35913 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE6BP35913 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE6BP35913 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
PDE6BP35913 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PDE6BP35913 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PDE6BP35913 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDE6BP35913 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PDE6BP35913 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6BP35913 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PDE6BP35913 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.08■□□□□ 0.32
PDE6BP35913 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6BP35913 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 NRADDP-202ENST00000641269 1585 ntBASIC17.07■□□□□ 0.32
PDE6BP35913 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 FGD5P1-202ENST00000614866 2498 ntBASIC17.07■□□□□ 0.32
PDE6BP35913 KRT8P25-201ENST00000473150 1456 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms