Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPS1P31327 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPS1P31327 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC19.17■□□□□ 0.66
CPS1P31327 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CPS1P31327 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CPS1P31327 NAA10-205ENST00000393712 908 ntTSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 HMGN1P4-201ENST00000419500 290 ntBASIC19.16■□□□□ 0.66
CPS1P31327 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC19.16■□□□□ 0.66
CPS1P31327 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC19.16■□□□□ 0.66
CPS1P31327 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 RN7SL2-201ENST00000490232 300 ntBASIC19.16■□□□□ 0.66
CPS1P31327 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 HAX1-211ENST00000532105 771 ntTSL 3 BASIC19.16■□□□□ 0.66
CPS1P31327 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC19.16■□□□□ 0.66
CPS1P31327 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC19.16■□□□□ 0.66
CPS1P31327 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC19.16■□□□□ 0.66
CPS1P31327 RN7SL4P-201ENST00000584058 295 ntBASIC19.16■□□□□ 0.66
CPS1P31327 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 AL121992.3-201ENST00000606186 346 ntBASIC19.16■□□□□ 0.66
CPS1P31327 AC006273.1-201ENST00000606966 861 ntBASIC19.16■□□□□ 0.66
CPS1P31327 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CPS1P31327 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC19.16■□□□□ 0.66
CPS1P31327 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CPS1P31327 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC19.16■□□□□ 0.66
CPS1P31327 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CPS1P31327 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPS1P31327 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CPS1P31327 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 AK2P2-201ENST00000439142 405 ntBASIC19.15■□□□□ 0.66
CPS1P31327 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 PRDX3P2-201ENST00000447051 611 ntBASIC19.15■□□□□ 0.66
CPS1P31327 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC19.15■□□□□ 0.66
CPS1P31327 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC19.15■□□□□ 0.66
CPS1P31327 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC19.15■□□□□ 0.66
CPS1P31327 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC19.15■□□□□ 0.66
CPS1P31327 MIR6871-201ENST00000613433 56 ntBASIC19.15■□□□□ 0.66
CPS1P31327 AC099795.2-201ENST00000639582 440 ntBASIC19.15■□□□□ 0.66
CPS1P31327 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPS1P31327 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CPS1P31327 AF013593.1-201ENST00000458074 1487 ntBASIC19.15■□□□□ 0.66
CPS1P31327 AC140479.7-201ENST00000636301 2332 ntBASIC19.15■□□□□ 0.66
CPS1P31327 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC19.15■□□□□ 0.66
CPS1P31327 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CPS1P31327 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.15■□□□□ 0.66
CPS1P31327 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC19.15■□□□□ 0.66
CPS1P31327 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CPS1P31327 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPS1P31327 IGHV7-56-201ENST00000518372 351 ntBASIC19.15■□□□□ 0.66
CPS1P31327 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC19.15■□□□□ 0.66
CPS1P31327 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC19.15■□□□□ 0.66
CPS1P31327 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 RAB42P1-201ENST00000555078 316 ntBASIC19.15■□□□□ 0.66
CPS1P31327 RN7SL162P-201ENST00000579233 292 ntBASIC19.15■□□□□ 0.66
CPS1P31327 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC19.15■□□□□ 0.66
CPS1P31327 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC19.15■□□□□ 0.66
CPS1P31327 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPS1P31327 AC073592.10-201ENST00000624789 597 ntBASIC19.15■□□□□ 0.66
CPS1P31327 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPS1P31327 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPS1P31327 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CPS1P31327 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPS1P31327 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC19.14■□□□□ 0.66
CPS1P31327 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPS1P31327 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms