Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14□□□□□ -0.17
VARSP26640 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14□□□□□ -0.17
VARSP26640 AL022313.4-201ENST00000562756 2046 ntBASIC14□□□□□ -0.17
VARSP26640 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14□□□□□ -0.17
VARSP26640 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VARSP26640 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 AGAP10P-201ENST00000454844 2418 ntBASIC13.99□□□□□ -0.17
VARSP26640 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.99□□□□□ -0.17
VARSP26640 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.99□□□□□ -0.17
VARSP26640 AC104506.1-201ENST00000609247 429 ntBASIC13.99□□□□□ -0.17
VARSP26640 AL096828.3-201ENST00000615354 462 ntBASIC13.99□□□□□ -0.17
VARSP26640 AC138649.2-201ENST00000615886 705 ntBASIC13.99□□□□□ -0.17
VARSP26640 CU633904.3-201ENST00000624042 1029 ntBASIC13.99□□□□□ -0.17
VARSP26640 AC138627.1-207ENST00000641560 1006 ntBASIC13.99□□□□□ -0.17
VARSP26640 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.99□□□□□ -0.17
VARSP26640 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
VARSP26640 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
VARSP26640 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
VARSP26640 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VARSP26640 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.99□□□□□ -0.17
VARSP26640 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 AC022762.2-201ENST00000600308 1353 ntBASIC13.98□□□□□ -0.17
VARSP26640 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 AC068760.1-201ENST00000493579 1953 ntBASIC13.98□□□□□ -0.17
VARSP26640 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 AC114271.1-201ENST00000612689 2813 ntBASIC13.98□□□□□ -0.17
VARSP26640 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
VARSP26640 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.98□□□□□ -0.17
VARSP26640 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 ACTG1P17-201ENST00000558391 1119 ntBASIC13.98□□□□□ -0.17
VARSP26640 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.98□□□□□ -0.17
VARSP26640 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.98□□□□□ -0.17
VARSP26640 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.98□□□□□ -0.17
VARSP26640 AL109620.1-201ENST00000618738 1197 ntBASIC13.98□□□□□ -0.17
VARSP26640 AL353726.2-201ENST00000623259 884 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms