Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 AC004554.1-201ENST00000422830 1468 ntBASIC14.47□□□□□ -0.09
ERCC2P18074 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.47□□□□□ -0.09
ERCC2P18074 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.47□□□□□ -0.09
ERCC2P18074 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 AF254983.2-201ENST00000612331 135 ntBASIC14.47□□□□□ -0.09
ERCC2P18074 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.47□□□□□ -0.09
ERCC2P18074 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 AGAP12P-201ENST00000585227 2359 ntBASIC14.47□□□□□ -0.09
ERCC2P18074 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ERCC2P18074 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.47□□□□□ -0.09
ERCC2P18074 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ERCC2P18074 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.46□□□□□ -0.09
ERCC2P18074 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 OR2K2-202ENST00000374428 1038 ntBASIC14.46□□□□□ -0.09
ERCC2P18074 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.46□□□□□ -0.09
ERCC2P18074 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.46□□□□□ -0.09
ERCC2P18074 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.46□□□□□ -0.09
ERCC2P18074 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 RTN3P1-201ENST00000536295 711 ntBASIC14.46□□□□□ -0.09
ERCC2P18074 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 AC242376.1-201ENST00000559033 726 ntBASIC14.46□□□□□ -0.09
ERCC2P18074 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.46□□□□□ -0.09
ERCC2P18074 AL353770.1-201ENST00000614915 403 ntBASIC14.46□□□□□ -0.09
ERCC2P18074 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ERCC2P18074 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.46□□□□□ -0.09
ERCC2P18074 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.46□□□□□ -0.09
ERCC2P18074 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERCC2P18074 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ERCC2P18074 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms