Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RB1P06400 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RB1P06400 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RB1P06400 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.71□□□□□ -0.05
RB1P06400 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RB1P06400 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RB1P06400 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
RB1P06400 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RB1P06400 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RB1P06400 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.71□□□□□ -0.06
RB1P06400 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RB1P06400 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RB1P06400 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
RB1P06400 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RB1P06400 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RB1P06400 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.7□□□□□ -0.06
RB1P06400 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.7□□□□□ -0.06
RB1P06400 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RB1P06400 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.7□□□□□ -0.06
RB1P06400 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RB1P06400 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
RB1P06400 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 RNA5SP491-201ENST00000362936 118 ntBASIC14.7□□□□□ -0.06
RB1P06400 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC14.7□□□□□ -0.06
RB1P06400 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.7□□□□□ -0.06
RB1P06400 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC14.7□□□□□ -0.06
RB1P06400 RNU1-80P-201ENST00000459500 161 ntBASIC14.7□□□□□ -0.06
RB1P06400 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.7□□□□□ -0.06
RB1P06400 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.7□□□□□ -0.06
RB1P06400 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.7□□□□□ -0.06
RB1P06400 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.7□□□□□ -0.06
RB1P06400 AC016582.2-202ENST00000587765 1094 ntBASIC14.7□□□□□ -0.06
RB1P06400 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RB1P06400 AL591424.3-201ENST00000614278 872 ntBASIC14.7□□□□□ -0.06
RB1P06400 AC110057.1-201ENST00000636031 898 ntBASIC14.7□□□□□ -0.06
RB1P06400 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
RB1P06400 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RB1P06400 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.7□□□□□ -0.06
RB1P06400 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RB1P06400 Z98885.3-201ENST00000624882 1757 ntBASIC14.7□□□□□ -0.06
RB1P06400 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.7□□□□□ -0.06
RB1P06400 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RB1P06400 FAM45BP-202ENST00000592932 1624 ntBASIC14.7□□□□□ -0.06
RB1P06400 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.69□□□□□ -0.06
RB1P06400 AC008620.2-201ENST00000510294 1569 ntBASIC14.69□□□□□ -0.06
RB1P06400 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.69□□□□□ -0.06
RB1P06400 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 NQO2-204ENST00000380454 851 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 KRT18P33-201ENST00000398525 1043 ntBASIC14.69□□□□□ -0.06
RB1P06400 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.69□□□□□ -0.06
RB1P06400 PHBP10-201ENST00000416467 784 ntBASIC14.69□□□□□ -0.06
RB1P06400 CD37-203ENST00000426897 1204 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC14.69□□□□□ -0.06
RB1P06400 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.69□□□□□ -0.06
RB1P06400 CCND3P1-201ENST00000438347 580 ntBASIC14.69□□□□□ -0.06
RB1P06400 PEBP1P3-201ENST00000455475 548 ntBASIC14.69□□□□□ -0.06
RB1P06400 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 AC004923.3-201ENST00000527532 355 ntBASIC14.69□□□□□ -0.06
RB1P06400 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.69□□□□□ -0.06
RB1P06400 RN7SL480P-201ENST00000581481 294 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms