Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 AC072061.1-201ENST00000569710 2234 ntBASIC12.61□□□□□ -0.39
ZIC3O60481 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 AL365181.3-201ENST00000605886 3222 ntBASIC12.61□□□□□ -0.39
ZIC3O60481 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.61□□□□□ -0.39
ZIC3O60481 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.61□□□□□ -0.39
ZIC3O60481 AL354861.1-201ENST00000445213 355 ntBASIC12.61□□□□□ -0.39
ZIC3O60481 RPL7P35-201ENST00000446943 740 ntBASIC12.61□□□□□ -0.39
ZIC3O60481 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
ZIC3O60481 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.61□□□□□ -0.39
ZIC3O60481 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.61□□□□□ -0.39
ZIC3O60481 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 KRT8P2-201ENST00000556193 944 ntBASIC12.61□□□□□ -0.39
ZIC3O60481 MIR4722-201ENST00000578292 60 ntBASIC12.61□□□□□ -0.39
ZIC3O60481 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.61□□□□□ -0.39
ZIC3O60481 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 AL049840.2-201ENST00000602722 535 ntBASIC12.61□□□□□ -0.39
ZIC3O60481 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 AL031673.1-201ENST00000611460 466 ntBASIC12.61□□□□□ -0.39
ZIC3O60481 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.61□□□□□ -0.39
ZIC3O60481 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZIC3O60481 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZIC3O60481 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZIC3O60481 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.6□□□□□ -0.39
ZIC3O60481 PES1P2-201ENST00000449745 1735 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZIC3O60481 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.6□□□□□ -0.39
ZIC3O60481 RPL3P2-204ENST00000413027 1203 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 AC005722.1-201ENST00000431878 964 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.6□□□□□ -0.39
ZIC3O60481 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.6□□□□□ -0.39
ZIC3O60481 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.6□□□□□ -0.39
ZIC3O60481 STK24P1-201ENST00000455035 1291 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms