Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AL512310.5-201ENST00000551999 515 ntBASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AC140658.4-201ENST00000561990 352 ntBASIC14.35□□□□□ -0.11
CCDC78A2IDD5 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AC068587.8-201ENST00000641239 219 ntBASIC14.35□□□□□ -0.11
CCDC78A2IDD5 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AL731571.1-201ENST00000617058 5428 ntBASIC14.35□□□□□ -0.11
CCDC78A2IDD5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 AC019294.4-201ENST00000561777 2905 ntBASIC14.35□□□□□ -0.11
CCDC78A2IDD5 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.34□□□□□ -0.11
CCDC78A2IDD5 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 MIR1908-201ENST00000410394 80 ntBASIC14.34□□□□□ -0.11
CCDC78A2IDD5 XBP1P1-201ENST00000436573 652 ntBASIC14.34□□□□□ -0.11
CCDC78A2IDD5 POM121L10P-201ENST00000436994 1285 ntBASIC14.34□□□□□ -0.11
CCDC78A2IDD5 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 RN7SL277P-201ENST00000481521 288 ntBASIC14.34□□□□□ -0.11
CCDC78A2IDD5 AC044849.1-201ENST00000519737 1188 ntBASIC14.34□□□□□ -0.11
CCDC78A2IDD5 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 RN7SL219P-201ENST00000582872 296 ntBASIC14.34□□□□□ -0.11
CCDC78A2IDD5 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 AHCYP4-201ENST00000419201 1315 ntBASIC14.34□□□□□ -0.11
CCDC78A2IDD5 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.34□□□□□ -0.11
CCDC78A2IDD5 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms