Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 TUBB2BP1-201ENST00000404155 871 ntBASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 LINC01907-201ENST00000415174 2609 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 CICP9-201ENST00000444451 1913 ntBASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 LINC00342-202ENST00000448494 2351 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 RN7SL606P-201ENST00000472779 293 ntBASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 EIF2A-214ENST00000487799 1913 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 SLC5A11-210ENST00000568579 2139 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 MIR4515-201ENST00000584082 81 ntBASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 ZNF730-202ENST00000597761 2374 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 AC064862.7-201ENST00000604520 867 ntBASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 AC131212.1-201ENST00000613771 668 ntBASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 HIST1H2BE-202ENST00000634910 2585 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 FAIM2-201ENST00000320634 4654 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 FERMT1-204ENST00000536936 3229 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 TSPAN2-202ENST00000369516 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 PTOV1-AS1-202ENST00000600742 3181 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
LINC01558Q9Y6Z2 TCN2-201ENST00000215838 2535 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 TROAP-201ENST00000257909 2527 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 NAGA-201ENST00000396398 3694 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 GBA-204ENST00000428024 1817 ntTSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AC008040.5-201ENST00000599781 1781 ntBASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 VPS33A-201ENST00000267199 4586 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 HOPX-205ENST00000420433 1543 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AC010201.2-201ENST00000605595 1495 ntBASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AC239800.2-201ENST00000443018 2675 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms