Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 LAP3P2-201ENST00000454686 1454 ntBASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 AC131212.3-201ENST00000624087 4219 ntBASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 AL008718.2-201ENST00000609206 1313 ntBASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 MIR326-201ENST00000362220 95 ntBASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 CHMP1AP1-201ENST00000445563 662 ntBASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 CSF2RBP1-201ENST00000447905 391 ntBASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 MSNP1-201ENST00000511640 1732 ntBASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 AC108024.1-201ENST00000626286 1721 ntBASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
AMBRA1Q9C0C7 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 PI4KAP2-201ENST00000360806 2080 ntBASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AC026954.1-201ENST00000429771 1293 ntBASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AL645933.1-201ENST00000440087 609 ntBASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 RNA5SP412-201ENST00000516234 123 ntBASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AC021016.3-201ENST00000608367 477 ntBASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 ZACNP1-201ENST00000612259 710 ntBASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms