Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 AC104073.2-201ENST00000453737 312 ntBASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 KRT8P13-201ENST00000463294 1010 ntBASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 AC005695.3-201ENST00000614522 232 ntBASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 AP000346.4-201ENST00000614827 381 ntBASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 AC125807.2-201ENST00000513358 3514 ntBASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 AL590824.1-201ENST00000403828 1349 ntBASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 SALL4P6-201ENST00000429385 1691 ntBASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 BTBD6P1-201ENST00000412176 1267 ntBASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 MIR6727-201ENST00000620702 65 ntBASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.86■□□□□ 0.29
UPF3BQ9BZI7 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 AL359845.1-201ENST00000458202 1648 ntBASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 SLC25A24P2-201ENST00000415059 510 ntBASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 RNA5SP423-201ENST00000517127 109 ntBASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 CR392039.2-201ENST00000623182 509 ntBASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 AC068587.8-201ENST00000641239 219 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms