Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CNN2P8-201ENST00000421872 913 ntBASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AL590640.2-201ENST00000457038 527 ntBASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AC003102.2-201ENST00000589195 1469 ntBASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AL138725.1-201ENST00000407347 1314 ntBASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 PER1-211ENST00000581082 4521 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 RPL7P3-201ENST00000441388 714 ntBASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 AC006453.4-201ENST00000636949 1252 ntBASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM53Q6P2H8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms