Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 PCDHB18P-202ENST00000526308 3197 ntBASIC12.99□□□□□ -0.33
CLDN20P56880 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLDN20P56880 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLDN20P56880 AL596276.2-201ENST00000447525 331 ntBASIC12.99□□□□□ -0.33
CLDN20P56880 AC090857.1-201ENST00000527400 390 ntBASIC12.99□□□□□ -0.33
CLDN20P56880 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CLDN20P56880 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CLDN20P56880 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 AC021016.3-201ENST00000608367 477 ntBASIC12.99□□□□□ -0.33
CLDN20P56880 AL021578.1-201ENST00000613646 709 ntBASIC12.99□□□□□ -0.33
CLDN20P56880 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
CLDN20P56880 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC073869.1-201ENST00000415574 2762 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 LAP3P2-201ENST00000454686 1454 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN20P56880 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CLDN20P56880 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 SLC25A24P2-201ENST00000415059 510 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.98□□□□□ -0.33
CLDN20P56880 ISCA2P1-201ENST00000425548 448 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC012618.1-201ENST00000461223 412 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC024681.1-201ENST00000521917 487 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.98□□□□□ -0.33
CLDN20P56880 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.98□□□□□ -0.33
CLDN20P56880 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.98□□□□□ -0.33
CLDN20P56880 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.98□□□□□ -0.33
CLDN20P56880 AC104506.1-201ENST00000609247 429 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.98□□□□□ -0.33
CLDN20P56880 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN20P56880 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.98□□□□□ -0.33
CLDN20P56880 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN20P56880 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms