Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 AC016700.1-201ENST00000429424 312 ntBASIC14.89□□□□□ -0.03
RFC1P35251 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 ZNF767P-206ENST00000513792 565 ntBASIC14.89□□□□□ -0.03
RFC1P35251 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.89□□□□□ -0.03
RFC1P35251 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 KRT18P8-201ENST00000581937 1246 ntBASIC14.89□□□□□ -0.03
RFC1P35251 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.89□□□□□ -0.03
RFC1P35251 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC1P35251 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 USP47-202ENST00000339865 7775 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC1P35251 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 AC068760.1-201ENST00000493579 1953 ntBASIC14.89□□□□□ -0.03
RFC1P35251 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFC1P35251 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RFC1P35251 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC1P35251 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RFC1P35251 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.88□□□□□ -0.03
RFC1P35251 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC1P35251 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC1P35251 RN7SL530P-201ENST00000485097 298 ntBASIC14.88□□□□□ -0.03
RFC1P35251 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 GOLGA2P8-201ENST00000505201 779 ntBASIC14.88□□□□□ -0.03
RFC1P35251 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.88□□□□□ -0.03
RFC1P35251 AP001258.2-201ENST00000529891 490 ntBASIC14.88□□□□□ -0.03
RFC1P35251 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RFC1P35251 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 AC138649.2-201ENST00000615886 705 ntBASIC14.88□□□□□ -0.03
RFC1P35251 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC1P35251 CR392039.2-201ENST00000623182 509 ntBASIC14.88□□□□□ -0.03
RFC1P35251 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 MARK2P9-201ENST00000430958 1727 ntBASIC14.88□□□□□ -0.03
RFC1P35251 AC073548.1-201ENST00000624088 1882 ntBASIC14.88□□□□□ -0.03
RFC1P35251 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC1P35251 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC1P35251 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC1P35251 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RFC1P35251 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RFC1P35251 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.87□□□□□ -0.03
RFC1P35251 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 AC107918.4-201ENST00000641966 3141 ntBASIC14.87□□□□□ -0.03
RFC1P35251 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.87□□□□□ -0.03
RFC1P35251 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.87□□□□□ -0.03
RFC1P35251 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFC1P35251 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms